Evolutionary complexities of swine flu H1N1 gene sequences of 2009

A recently emerged novel influenza A (H1N1) virus continues to spread globally. The pandemic caused by this new H1N1 swine influenza virus presents an opportunity to analyze the evolutionary signif- icance of the origin of the new strain of swine flu. Our study clearly suggests that strong purif...

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Main Author: Roy, Ayan
Format: Article
Language:English
Published: ELSEVIER 2025
Online Access:https://repository.auw.edu.bd/handle/123456789/708
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author Roy, Ayan
author_facet Roy, Ayan
author_sort Roy, Ayan
collection institutional Repository
description A recently emerged novel influenza A (H1N1) virus continues to spread globally. The pandemic caused by this new H1N1 swine influenza virus presents an opportunity to analyze the evolutionary signif- icance of the origin of the new strain of swine flu. Our study clearly suggests that strong purifying selection is responsible for the evolution of the novel influenza A (H1N1) virus among human. We observed that the 2009 viral sequences are evolutionarily widely different from the past few years’ sequences. Rather, the 2009 sequences are evolutionarily more similar to the most ancient sequence reported in the NCBI Influenza Virus Resource Database collected in 1918. Analysis of evolutionary rates also supports the view that all the genes in the pandemic strain of 2009 except NA and M genes are derived from triple reassorted swine viruses. Our study demonstrates the importance of using complete-genome approach as more sequences will become available to investigate the evolutionary origin of the 1918 influenza A (H1N1) swine flu strain and the possibility of future reassortment events.
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spelling 123456789-7082026-02-18T06:15:28Z Evolutionary complexities of swine flu H1N1 gene sequences of 2009 Roy, Ayan A recently emerged novel influenza A (H1N1) virus continues to spread globally. The pandemic caused by this new H1N1 swine influenza virus presents an opportunity to analyze the evolutionary signif- icance of the origin of the new strain of swine flu. Our study clearly suggests that strong purifying selection is responsible for the evolution of the novel influenza A (H1N1) virus among human. We observed that the 2009 viral sequences are evolutionarily widely different from the past few years’ sequences. Rather, the 2009 sequences are evolutionarily more similar to the most ancient sequence reported in the NCBI Influenza Virus Resource Database collected in 1918. Analysis of evolutionary rates also supports the view that all the genes in the pandemic strain of 2009 except NA and M genes are derived from triple reassorted swine viruses. Our study demonstrates the importance of using complete-genome approach as more sequences will become available to investigate the evolutionary origin of the 1918 influenza A (H1N1) swine flu strain and the possibility of future reassortment events. 2025-07-22T05:34:43Z 2025-07-22T05:34:43Z 2009 Article https://repository.auw.edu.bd/handle/123456789/708 en application/pdf ELSEVIER
spellingShingle Roy, Ayan
Evolutionary complexities of swine flu H1N1 gene sequences of 2009
title Evolutionary complexities of swine flu H1N1 gene sequences of 2009
title_full Evolutionary complexities of swine flu H1N1 gene sequences of 2009
title_fullStr Evolutionary complexities of swine flu H1N1 gene sequences of 2009
title_full_unstemmed Evolutionary complexities of swine flu H1N1 gene sequences of 2009
title_short Evolutionary complexities of swine flu H1N1 gene sequences of 2009
title_sort evolutionary complexities of swine flu h1n1 gene sequences of 2009
url https://repository.auw.edu.bd/handle/123456789/708
work_keys_str_mv AT royayan evolutionarycomplexitiesofswinefluh1n1genesequencesof2009